Methods of sputum decontamination with emphasis on local tuberculosis laboratories

Samenvatting

One of the major goals for the global control of tuberculosis (TB) in humans is the laboratory diagnosis of Mycobacterium tuberculosis the causative agent of TB. This organism is present in sputum specimens which are often contaminated by other fast growing microflora. Therefore, the use of rapid and effective diagnostic methods for optimal detection of Mycobacterium tuberculosis is required through different decontamination methods. This review considers some of the decontamination methods that have been described for the recovery of M. tuberculosis based on published print and electronic articles. Some of these methods have limitations which may make them unsuitable for use in most local laboratories in the developing world; and these include unavailability of essential reagents and materials, cost of acquiring equipment, lack of skilled personnel and undue delay in the time of processing samples. Despite these challenges, there are some methods
that have potentials of being adapted for use in clinical mycobacteriology laboratories in developing countries particularly Nigeria. With the correct laboratory logistics put in place, the simplified concentration, KudohKudoh, and modified Petroff methods may go a long way in achieving effective sputum decontaminations under local setting. The potentials and challenges of using other decontamination methods are discussed.

Keywords: Mycobacterium tuberculosis, diagnostic methods, sputum, decontamination,

Résumé
L’un des objectifs majeur du contrôle global de la tuberculose (TB) chez les humains est le diagnostique de laboratoire de la Mycobacterium, cause de la TB. Cet organisme est présent dans les spécimens qui sont parfois contamine par les autres croissances rapides des flores microbiennes. Cependant, l’usage des méthodes de diagnostics rapide et effectifs pour la détection optimale des tuberculose mycobacterium est recommandé a travers différentes méthodes de décontamination. Cette revue considère certaines méthodes de décontamination qui ont été décrit pour le recyclage des Tuberculose M. sur la base des articles électroniques publiés. Certaines de ces méthodes ont des limitations qui peuvent les défavoriser pour l’utilisation dans les laboratoires locaux
dans un monde développé; et ceci inclut l’indisponibilité des agents et des matériels, cout d’acquisition des équipements, manque de personnel qualifié et les délais non respectés au cours des manipulations des échantillons. Malgré ces défis, il existe certaines méthodes qui ont le potentiel d’être adapté à l’usage en laboratoire Clinique de mycobactériologie dans les pays développés particulièrement au Nigeria. Avec des laboratoires et logistiques justes mis en place, la concentration simplifiée, les méthodes Kudoh-Kudoh, et modifiés Petroff peuvent aider à achever des décontaminations effectives de crachats de façon locale. Les potentiels et les défis de l’utilisation des autres méthodes de décontamination sont discutés.

Correspondence: Dr. SIB Cadmus, Department of Veterinary Public Health and Preventive Medicine, University of Ibadan, Ibadan, Nigeria. E-mail: sibcadmus@yahoo.com

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Referenties

Shrestha D, Bhattacharya SK, Lekhak B and Rajendra Kuma BC. Evaluation of different staining techniques (Ziehl Neelsen Stain, Kinyoun Stain, Modified Cold Stain, Fluorochrome Stain) for the diagnosis of pulmonary tuberculosis. J Nepal Health Res Council 2005; 3:8-16.

Pereira M, Tripathy S, Inamdar V, et al. Drug resistance pattern of Mycobacterium tuberculosis in seropositive and seronegative HIV-TB patients in Pune, India. Indian J Med Res 2005; 121: 235-239.

Chakravorty S, Dudeja M, Hanif M and Tyagi JS. Utility of universal sample processing methodology, combining smear microscopy, culture, and PCR, for diagnosis of pulmonary tuberculosis. J Clin Microbiol 2005; 43:2703-2708.

Ponticeellio A, Perna F, Sturbenboom MCJM, Etiello IM, Bocchino M and Sanduzzi A. Demographic risk factors and lymphocyte populations in patients with tuberculosis and their healthy contacts. Int J Tuberc Lung Dis 2001; 5(12):1148-1155.

Della LP. Mycobacteriology and mycobacterial susceptibility tests. In: Clinical Microbiology Procedures Handbook, 2nd edition. ASM Press 2004

Harries A, Mahner D and Uplekar M. National tuberculosis programme: A clinical manual for Nepal, 1st Edition 1998; 11-23

Behr MA, Warren SA, Salamon H, Hopewell PC, Leon AP and Daley CL. Transmission of M. tuberculosis from patients smear negative for acid fast bacilli. Lancet 1999; 353: 444-449.

Lordi G. Tuberculosis. McGraw-Hill Encyclopedia of Science and Technology 9th Edition 2002; 18: 684-686

Obiaga GO. The role of pharmacists in the fight against the scourge of tuberculosis in Nigeria. Nig J Pharm. 2000; 31:14-18.

Davies PDO. Tuberculosis. Encyclopedia of Life Sciences, Macmillian Publishing Ltd, Nature Publishing Group 2002; 18: 609-618.

Karin W, Roxanna R., Valerie M. and Paul VH. Part 111: culture homogenization and decontamination. Tuberculosis 2006 Available from http://www.sahhealthinfo.org/ tb/culture homo genisation.htm.

Grandjean L, Martin L, Gulman RH, et al. Direct tuberculosis cultures in selective broth without decontamination or centrifugation. J Clin Microbiol 2008. Available from http:jcm.asm.org /cgi/reprint/JCM.02476-07

World Health Organization (WHO). Guidelines for surveillance of drug resistance in tuberculosis. 2003 Geneva

Yajko DM, Nassos PS and Sanders CA. Comparison of four decontamination methods for the recovery of Mycobacterium avium complex from stools. J Clin Microbiol. 1993; 31: 302-306.

Allen BW and Baker FJ. Mycobacteria isolation, identification and sensitivity testing. London: Butterworths 1968; 10.

Garay JE. Analysis of a simplified concentration sputum smear technique for pulmonary tuberculosis diagnosis in rural hospitals. Tropical Doctor 2000; 30: 70-72.

Weyer K, Rustomjee R, Mizrahi V and van Helden P. Tuberculosis; Part III: Culture homogenization and decontamination. http://www.sahealthinfo.org/tb/culturehomogenisation.thm (accessed 2nd May, 2010).

Kent PT and Kubica GP. Public health mycobacteriology: A guide for the level III laboratory. Atlanta. Center for disease control.1985.

Dorothy YM, Thomas B, Ernestina MQ, Samuel O, David OA and Gerd P. Evaluation of decontamination methods and growth media for primary isolation of Mycobacterium ulcerans from surgical specimens. J Clin Microbiol 2004;42: 5875 - 5876.

Nassau E. Bacteriological examination in tuberculosis. Tubercle (London). 1954, 35 (Colonial suppl. No. 3).

Oliver J and Reusser TR. Rapid method for the concentration of tubercle bacilli. Am Rev Tuberc 1942; 45: 450-452.

Loretta AC, Lucy BC, Lee AB and Martin SF. Efficacy of chemical dosing methods for isolating nontuberculous mycobacteria from water supplies of dialysis centers. Appl Environ Microbiol 1998; 54: 1756-1760.

Githui WA, Matu SW, Tunge N and Juma E. Biocidal effect of bleach on Mycobacterium tuberculosis: a safety measure. Int. J Tuberc Lung Dis 2007; 11: 798-802.

Miomer H, Gebre N and Karlsson U. Diagnosis of pulmonary tuberculosis. Lancet 1994; 344:127.

Angeby KAK, Hoffner SE and Diwan VK. Should the ‘bleach microscopy method’ be recommended for improved case detection of tuberculosis? Literature review and key person analysis. Int J Tuberc Lung Dis 2004; 8:806-815.

Bonnet M, Ramsay A, Githui W, Gagnidze L, Varaine F and Guerin PJ. Bleach sedimentation: an opportunity to optimize smear microscopy for tuberculosis diagnosis in settings of prevalence of HIV. Clin Infect Dis 2008; 1 (46):1710 - 1716.

Hirsch JG. The resistance of tubercle bacilli to the bactericidal action of benzalkonium chloride (Zephiran). Amer Rev Tuber 1954; 70 (2): 312.

Patterson RA, Thompson TL and Larsen DH. The use of Zephiran in the isolation of tubercle bacilli. Amer Rev Tuber 1956; 74 (2) (Part I): 284.

Wayne LG, Krasnow I and Kidd G. Finding the “hidden positive” in tuberculosis eradication programs. The role of the sensitive tri-sodium phosphate- benzalkonium (Zephiran) culture technique. Am Rev Respir Dis 1962; 86: 537-541.

Webb, WR. Clinical evaluation of a new mucolytic agent, acetylcysteine. J. Thoracic Cardiovascular Surg 1962; 44: 330-343.

Sheffner AL. The reduction “in-vitro” in viscosity of mucoprotein solutions by a new mucolytic agent, N-acetyl-L-cysteine. Ann NYAcad Sci 1963; 106: 289-297.

Sheffner AL, Meddler EM, Jacobs LW and Sarett HP. The in-vitro reduction in viscosity of humans tracheobronchial secretions by acetylcysteine. Am Rev Respir Dis 1964; 90: 721-729.

Kubica GPW, Dye E, Cohn ML and Middlebrook G. Sputum digestion and decontamination with N-acetyl-L cysteine sodium hydroxide for culture of mycobacteria. Am Rev Respir Dis 1963; 87:775–779.

Kubica GP, Kuafmann AJ and Dye WE. Comments on the use of the new mucolytic agent, N-acetyl L cysteine, as a sputum digestant for the isolation of mycobacteria. Am Rev Respir Dis 1964; 89: 284 - 286.

Smithwick RW, Stratigos CB and David HL. Use of cetylpyridinium chloride and sodium chloride for the decontamination of sputum specimens that are transported to the laboratory for the isolation of Mycobacterium tuberculosis. J Clin Microbiol 1975; 1: 411-413.

Selvakumar N, Sudhamathi S, Duraipandian M, Frieden TR and Narayanan PR. Reduced detection by Ziehl-Neelsen method of acid-fast bacilli in sputum samples preserved in cetylpyridinium chloride solution. Int J Tuberc Lung Dis 2004; 8: 248-252.

Selvakumar N, Gomathi SM, Kumar V, Bhaskar RDV, Rahman F and Narayanan PR. Sensitivity of Ziehl-Neelsen method for centrifuged deposit smears of sputum samples transported in cetylpyridinium chloride. Indian J Med Res 2006; 124: 439-442.

Kudoh S and Kudoh T. A simple technique for culturing tubercle bacilli. Bull World Hlth Org 1974; 51: 71–82.

Jaspe RC, Rojas YM, Flores LA, Toro ES, Takiff H and de Waard JH. Evaluation of the Kudoh swab method for the culturing of Mycobacterium tuberculosis in rural areas. Trop Med Int Hlth 2009; 14 (4): 468–471.

Farnia M, Mohammadi F, Zarifi Z, et al. Improving sensitivity of direct microscopy for detection of acid- fast bacilli in sputum: use of chitin in mucus digestion. J. Clin. Microbiol 2002; 40: 508- 511.

Thornton CG, Kerry MM, Thomas LB, DeniseEL, Mark R and June T. Novel method for processing respiratory specimens for detection of mycobacteria by using C18 Carboxypropylbetanine: Blinded Study. J Clin Microbiol 1998; 36: 1996-2003.

Jena N and Panda BN. Rapid slide culture using a simple concentration method for rapid and better primary isolation of Mycobacterium tuberculosis. Ind J Tuberc 1998; 45(3): 176.

Jena J and Panda BN. Evaluation of trisodium phosphate as a transport medium and its utility in a single-step decontamination technique for the culture of M. tuberculosis. Ind J Tuberc 2004; 51: 137-141.

Chakravorty S and Tyagi JS. Novel multipurpose methodology for detection of mycobacteria in pulmonary and extra pulmonary specimen by smear microscopy, culture, and PCR. J Clin Microbiol 2005; 43: 2697-2702.